Automated Defacing Tools
- A free Mac application to help you avoid distracting websites.
- Published Skullcandy for Android operating system mobile devices, but it is possible to download and install Skullcandy for PC or Computer with operating systems such as Windows 7, 8, 8.1, 10 and Mac. Let's find out the prerequisites to install Skullcandy on Windows PC or MAC computer without much delay.
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See also MBIRN page
Cite this paper is using mri_deface: A Technique for the Deidentification of Structural Brain MR Images
Note: A license file is no longer necessary to use these tools:
mri_deface v1.22 for Linux
mri_deface v1.22 for Mac OS
talairach_mixed_with_skull.gca
face.gca
Use gunzip to decompress these downloads, ie.: Animal crossing wild world wii.
The command usage is:
So as an example, to deface your T1-weighted input file, which can be a dicom or nifti, run:
You will need a volume viewer to view the resulting defaced file. The freesurfer package includes the 'freeview' viewer, but there are many others capable of reading dicom and nifti volumes. MRIcron is a good option (use MRIcron, not MRIcro, because you will want nifti support).
Sample input before and after defacing:
Skull Refuge Mac Os X
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